I am editing my post because I realized after I posted that i was just reading the first page of posts in this thread. It's still true:
"Correct - Botryococcus braunii oils (botryococcenes) can not be transesterified. They must be cracked. This means there is no glyercerin side-product. Botryococcus braunii has great potential, but it is not as easy to process as vegetable oils, which can be made into biodiesel. This is why, even though I am a great supporter of research on Bb, I encourage people who want to make their own fuel to start with other algal oils and to make biodiesel. I believe that Botryococcene processing is best done in a large-scale chemical plant. "
However now we are talking about whether there is a glycerine shortage or not. My understanding is that most glycerine is used in food and cosmetics - which in most countries call for greater quality control. Much greater quality control, so that no poisons can get in. In some places, the process you used must be certified as safe by an engineer. The more involved processing, and certification, cost money, so small producers don't do it. So they have waste glycerine, while the market for food-grade glycerine is still high. However, this waste glycerine is evidently perfectly suitable to be mixed in with animal feed. I read about one fellow feeding it to his goats, and the goats really liked it, and it's very nutritious. If you poison your own animals due to contaminants in glycerine, the loss is yours and the animals. However, if you poison a human...well that's a whole different story.
I'd be very circumspect about getting into the food-grade glycerine market right now. If you are a big-budget biodiesel processor, it might be worth it. Small-scale operations should take some elementary precautions, and then look into selling glycerine for animal feed, rather than dumping it as waste. I think it's a more profitable solution than using it to grow Bb, but that's just my guess.